BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031G10LP1|AL429462
(979 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig329 853 0.0
>3x_Contig329
Length = 2187
Score = 853 bits (430), Expect = 0.0
Identities = 437/438 (99%), Gaps = 1/438 (0%)
Strand = Plus / Plus
Query: 531 tcatgattganagagccattgtatggaagaatggtgtgatttcaatcatttcagagccaa 590
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 25 tcatgattga-agagccattgtatggaagaatggtgtgatttcaatcatttcagagccaa 83
Query: 591 tcgctgatgggaaggacgacaatccaagggagaagcacagctgacaaattaccgttgata 650
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 tcgctgatgggaaggacgacaatccaagggagaagcacagctgacaaattaccgttgata 143
Query: 651 cataaaacatcgataagccagtaggtccaagatgcgaaaacaatggttctgtgattggga 710
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 cataaaacatcgataagccagtaggtccaagatgcgaaaacaatggttctgtgattggga 203
Query: 711 agatgatcataccatatgacaaagcgtccaaaatgttcaacaacaaaccaagcccaacag 770
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 agatgatcataccatatgacaaagcgtccaaaatgttcaacaacaaaccaagcccaacag 263
Query: 771 caggagtgtactggaatatcctcaacatcaaatcacgagctttatcatagtgcgacatac 830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 caggagtgtactggaatatcctcaacatcaaatcacgagctttatcatagtgcgacatac 323
Query: 831 tagaacggaatccttgcgaagtgaaaccaccagaacttgctccatcgggtaacaaggata 890
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tagaacggaatccttgcgaagtgaaaccaccagaacttgctccatcgggtaacaaggata 383
Query: 891 tgtattgagtggcaggttgattctcttcatcgaaagttccatattctacgtacatagagt 950
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtattgagtggcaggttgattctcttcatcgaaagttccatattctacgtacatagagt 443
Query: 951 tatgcgaatttgtaggca 968
||||||||||||||||||
Sbjct: 444 tatgcgaatttgtaggca 461
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7040
Number of Sequences: 1807
Number of extensions: 7040
Number of successful extensions: 27
Number of sequences better than 1.0e-20: 1
length of query: 979
length of database: 10,358,551
effective HSP length: 16
effective length of query: 963
effective length of database: 10,329,639
effective search space: 9947442357
effective search space used: 9947442357
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)